STOP and READ:
Please show the effort you've put in to solving the problem and please be specific -- people are volunteering their time to help you! Low effort posts are not likely to get good answers! DO NOT REDACT any information except passwords/keys/personal info. You should use 3 backticks to begin and end your paste to make it readable. Or use a service such as https://pastebin.com or https://gist.github.com/
What is the problem you are having with rclone?
What is your rclone version (output from rclone version)
Which OS you are using and how many bits (eg Windows 7, 64 bit)
Which cloud storage system are you using? (eg Google Drive)
The command you were trying to run (eg rclone copy /tmp remote:tmp)
Try running rclone md5sum --transfers 8 /path/to/.git first - that will download all the git files and get them in the cache.
Git is quite sensitive to file system latency I think as it does lots of operations. If you put an ssh connection in there then the latency will go up from a few uS to 1 or 10 mS which you really notice when there are lots of files.