it is able to reproduce my current directory structure and content in the source "/data" to the protondrive directory "server" but it does not delete either files or directories at the destination which are no longer in the source.
i have confirmed that i am running sync and not copy.
thanks. i set up a test directory and files and sync worked as expected. re-running on my larger dataset--now suspecting that maybe its a changed permission issue. thanks for forcing me to look up and use debug.