I deleted the files, they went away. I closed down the mount process, relaunched it, and the files are still there. I checked on another machine with rclone lsd gcrypt: and they are still there.
Okay, so since I had another machine with a mount, it didn’t like all the deletes and kinda I guess locked the files in a state where they’d show they were deleted but if you refreshed they were still there. All good now.